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https://github.com/nlmatics/nlm-ingestor.git
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Merge branch 'main' into main
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31
Dockerfile
31
Dockerfile
@@ -4,26 +4,26 @@ RUN apt-get update && apt-get -y --no-install-recommends install libgomp1
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ENV APP_HOME /app
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# install Java
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RUN mkdir -p /usr/share/man/man1 && \
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apt-get update -y && \
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apt-get install -y openjdk-17-jre-headless
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apt-get update -y && \
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apt-get install -y openjdk-17-jre-headless
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# install essential packages
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RUN apt-get install -y \
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libxml2-dev libxslt-dev \
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build-essential libmagic-dev
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libxml2-dev libxslt-dev \
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build-essential libmagic-dev
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# install tesseract
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RUN apt-get install -y \
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tesseract-ocr \
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lsb-release \
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&& echo "deb https://notesalexp.org/tesseract-ocr5/$(lsb_release -cs)/ $(lsb_release -cs) main" | tee /etc/apt/sources.list.d/notesalexp.list > /dev/null \
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&& apt-get update -oAcquire::AllowInsecureRepositories=true \
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&& apt-get install notesalexp-keyring -oAcquire::AllowInsecureRepositories=true -y --allow-unauthenticated \
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&& apt-get update \
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&& apt-get install -y \
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tesseract-ocr libtesseract-dev \
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&& wget -P /usr/share/tesseract-ocr/5/tessdata/ https://github.com/tesseract-ocr/tessdata/raw/main/eng.traineddata
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tesseract-ocr \
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lsb-release \
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&& echo "deb https://notesalexp.org/tesseract-ocr5/$(lsb_release -cs)/ $(lsb_release -cs) main" | tee /etc/apt/sources.list.d/notesalexp.list > /dev/null \
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&& apt-get update -oAcquire::AllowInsecureRepositories=true \
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&& apt-get install notesalexp-keyring -oAcquire::AllowInsecureRepositories=true -y --allow-unauthenticated \
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&& apt-get update \
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&& apt-get install -y \
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tesseract-ocr libtesseract-dev \
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&& wget -P /usr/share/tesseract-ocr/5/tessdata/ https://github.com/tesseract-ocr/tessdata/raw/main/eng.traineddata
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RUN apt-get install unzip -y && \
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apt-get install git -y && \
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apt-get autoremove -y
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apt-get install git -y && \
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apt-get autoremove -y
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WORKDIR ${APP_HOME}
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COPY . ./
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RUN pip install --upgrade pip setuptools
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@@ -34,4 +34,5 @@ RUN python -m nltk.downloader stopwords
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RUN python -m nltk.downloader punkt
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RUN python -c "import tiktoken; tiktoken.get_encoding(\"cl100k_base\")"
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RUN chmod +x run.sh
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EXPOSE 5001
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CMD ./run.sh
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