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• a6fe083ddc Update README.md main Robert Jakob 2025-05-31 20:13:45 +02:00
• f8ce707fcb Update README.md Robert Jakob 2025-05-31 20:13:02 +02:00
• a8c3592a13 Update README.md Robert Jakob 2025-05-31 19:17:39 +02:00
• 29867d842c Update README.md Robert Jakob 2025-05-31 19:15:51 +02:00
• 2bae4cc770 Update README.md Robert Jakob 2025-05-31 18:33:35 +02:00
• b1d26f6745 Update README.md feature/run-all-from-json Robert Jakob 2025-05-28 13:57:14 +02:00
• 0a17906a9c Update README.md Robert Jakob 2025-05-28 13:55:16 +02:00
• c3e3b8ba45 Merge pull request #22 from robertjakob/feature/update-readmes Robert Jakob 2025-05-28 13:52:52 +02:00
• 245ea3dd59 docs: Update READMEs with cloud version info and remove private repo references feature/update-readmes Robert Jakob 2025-05-28 13:52:15 +02:00
• b40beb8b01 Update README.md Robert Jakob 2025-05-28 13:33:04 +02:00
• f3ebd76e91 Update README.md Robert Jakob 2025-05-28 13:31:59 +02:00
• 8f52d6b2fc Add files via upload Robert Jakob 2025-05-26 00:11:43 +02:00
• c3ea2c87c9 Update README.md Robert Jakob 2025-05-23 07:44:53 +02:00
• 9071e00370 Deleting tracked files Kevin O'Sullivan 2025-05-12 13:54:00 +02:00
• 7c2dad0338 Update .gitignore Kevin O'Sullivan 2025-05-12 13:51:11 +02:00
• a6c9b9d95b Update .gitignore Kevin O'Sullivan 2025-05-12 13:18:08 +02:00
• 1f695bc625 Update README.md Robert Jakob 2025-05-11 14:40:41 +02:00
• 3f153558c0 Update README.md Robert Jakob 2025-05-11 14:40:32 +02:00
• d3b12031d0 Update README.md Robert Jakob 2025-05-11 01:24:47 +02:00
• ff2120b816 Update README.md Robert Jakob 2025-05-11 01:24:08 +02:00
• a75777e62e Merge pull request #21 from robertjakob/feature/peer-review-v0.1 Robert Jakob 2025-05-11 01:12:20 +02:00
• ab9701ffae feat: Add comprehensive peer review system v0.1 with multi-agent architecture feature/peer-review-v0.1 backup/current-state Robert Jakob 2025-05-11 01:11:38 +02:00
• 34de795749 Merge pull request #20 from robertjakob/new-branch Robert Jakob 2025-05-11 00:47:00 +02:00
• 0449731b1b Refined README and updated paths for portability new-branch Robert Jakob 2025-05-11 00:38:27 +02:00
• 09b70a6a35 Merge pull request #19 from robertjakob/feature/open-source-prep Robert Jakob 2025-05-10 23:59:22 +02:00
• 14383d721f Merge branch 'main' into feature/open-source-prep feature/open-source-prep Robert Jakob 2025-05-10 23:59:11 +02:00
• 85deb1d084 Prep for open source: PDF generation, streamlined README, backup note, transparency statement Robert Jakob 2025-05-10 23:57:27 +02:00
• 23609472c1 Update README.md Robert Jakob 2025-05-10 18:16:04 +02:00
• 19e79d1303 Update README.md Robert Jakob 2025-05-10 18:13:07 +02:00
• 544ae97fab Merge pull request #18 from robertjakob/feature/executive-summary-agent Robert Jakob 2025-05-10 18:05:38 +02:00
• d29aca6f14 Add Executive Summary Agent with two-step reasoning process and balanced summary approach feature/executive-summary-agent Robert Jakob 2025-05-10 18:04:35 +02:00
• 3a41c3bb07 Merge pull request #17 from robertjakob/update-readme-quality-control Robert Jakob 2025-05-10 16:44:15 +02:00
• 35b9ea2fcb Update README.md to include Quality Control Agent documentation update-readme-quality-control Robert Jakob 2025-05-10 16:42:57 +02:00
• e56d7e1e60 Merge pull request #16 from robertjakob/optimize-quality-control Robert Jakob 2025-05-10 01:38:23 +02:00
• edba7eeba2 Add quality control agent implementation with token optimization plan optimize-quality-control Robert Jakob 2025-05-10 01:37:30 +02:00
• fd387cb25b Merge pull request #15 from robertjakob/context-json-enhancement Robert Jakob 2025-05-09 00:46:31 +02:00
• e6f7ccd2a7 Enhance context.json structure and update READMEs for new agent features and planning status context-json-enhancement Robert Jakob 2025-05-09 00:44:55 +02:00
• ec59d2d5e9 Update README files to reflect new directory structure and A2 development status feature/a1-analysis Robert Jakob 2025-05-08 22:40:26 +02:00
• f2959e8819 Merge pull request #14 from robertjakob/feature/a1-analysis Robert Jakob 2025-05-08 22:36:15 +02:00
• c070016c0c Reorganize repository structure: Move V2-V6 to Backup, create A1_Peer_Review and A2_Outlet_Fit Robert Jakob 2025-05-08 22:35:10 +02:00
• 07b29cdc7d Update V6_multi_agent3 to use 1-5 scoring scale consistently across all agents Robert Jakob 2025-05-08 16:27:17 +02:00
• c6675de14f Merge pull request #13 from robertjakob/feature/flask-integration Kevin 2025-05-06 22:36:03 +02:00
• 431a8b6ad9 Simple flask api with task queuing and task completion email feature/flask-integration Kevin O'Sullivan 2025-05-06 22:35:40 +02:00
• ce5d9b76af Merge pull request #12 from robertjakob/feature/improved-comprehensive-report Robert Jakob 2025-05-06 22:26:21 +02:00
• 4f2d1126ff feat: improve comprehensive report agent with chunked processing and enhanced Word document format feature/improved-comprehensive-report Robert Jakob 2025-05-06 22:25:23 +02:00
• a8884cdc4a First iteration of a task working Kevin O'Sullivan 2025-05-06 18:51:41 +02:00
• d777fff17c Merge pull request #11 from robertjakob/feature/pdf-processing-improvements Robert Jakob 2025-05-05 20:16:01 +02:00
• 732134d9d5 Restore V2 and V3 directories feature/pdf-processing-improvements Robert Jakob 2025-05-05 20:15:35 +02:00
• 98d82f714e Merge pull request #10 from robertjakob/feature/pdf-processing-improvements Robert Jakob 2025-05-04 05:31:50 +02:00
• e9781a8024 Update V5_multi_agent2 with latest analysis results and agent improvements Robert Jakob 2025-05-04 05:30:56 +02:00
• 1d99826d97 Merge pull request #9 from robertjakob/feature/pdf-processing-improvements Robert Jakob 2025-04-28 17:32:45 +02:00
• 27dd6dfe2a feat: Update agent structure and improve PDF processing - Standardize agent method names and response formats - Update base agent and controller agent implementations - Add comprehensive analysis results Robert Jakob 2025-04-28 17:27:56 +02:00
• c533f69f34 Update analysis results with new manuscript review (FDA Nutrition Info Label study) Robert Jakob 2025-04-27 17:05:39 +02:00
• 7ad1367eaa Update manuscript report and analysis results with improved scoring and feedback Robert Jakob 2025-04-27 16:22:09 +02:00
• 120985c10a Merge pull request #8 from robertjakob/feature/pdf-processing-improvements Robert Jakob 2025-04-27 14:28:30 +02:00
• 9409c765c7 fix: improve S1 agent to prevent keyword hallucination when no keywords section exists Robert Jakob 2025-04-27 14:24:37 +02:00
• ef1c6257e9 Refocus S1 agent on generating one ideal title with detailed explanations Robert Jakob 2025-04-27 09:50:38 +02:00
• eb77bd184d Update README.md Robert Jakob 2025-04-25 22:30:48 +02:00
• 436fce9a97 Merge pull request #7 from robertjakob/feature/pdf-processing-improvements Robert Jakob 2025-04-25 22:30:17 +02:00
• f28ef91356 Update top-level README with information about V5_multi_agent2 Robert Jakob 2025-04-25 22:28:17 +02:00
• 4b73e380f8 Merge pull request #6 from robertjakob/feature/pdf-processing-improvements Robert Jakob 2025-04-24 02:52:14 +02:00
• 0bde8cb108 Fix method call mismatches and score handling in report generation. Added documentation and removed unused files. Robert Jakob 2025-04-24 02:48:12 +02:00
• 0be62df303 Merge pull request #5 from robertjakob/feature/pdf-processing-improvements Robert Jakob 2025-04-24 00:50:18 +02:00
• 3f19cbf4c1 feat: Add section agents (S1-S10) and improve report generation - Add section-specific agents for manuscript review - Update json_to_report.py with proper score field mapping - Add run_analysis.py script for automated analysis - Update manuscript report generation with table of contents Robert Jakob 2025-04-24 00:48:27 +02:00
• 8a8fe5a1cf Merge pull request #4 from robertjakob/feature/pdf-processing-improvements Robert Jakob 2025-04-23 22:21:03 +02:00
• 1d7ab862e9 Enhanced PDF processing with improved figure and table detection, added manuscript data extraction, and updated agent implementations Robert Jakob 2025-04-23 22:19:05 +02:00
• 9a761f3d46 Merge pull request #3 from robertjakob/feature/v5-multi-agent Robert Jakob 2025-04-23 00:02:07 +02:00
• 0e07a29573 V5: Complete implementation with all agents (R1-R7, W1-W8) and report generation feature/v5-multi-agent Robert Jakob 2025-04-23 00:01:01 +02:00
• 96cba7ee03 Merge pull request #2 from robertjakob/feature/v5-multi-agent Robert Jakob 2025-04-21 23:28:59 +02:00
• 11c82ce5eb Add V5 multi-agent system with specialized reviewer agents for scientific manuscript analysis Robert Jakob 2025-04-21 23:26:54 +02:00
• 5dbe42a299 Merge pull request #1 from robertjakob/feature/specialized-reviewer-feedback Robert Jakob 2025-04-20 23:07:01 +02:00
• a45651eb52 Add specialized reviewer feedback system with comprehensive review structure feature/specialized-reviewer-feedback Robert Jakob 2025-04-20 23:05:16 +02:00
• 302f14a33a Update README with comprehensive V4 documentation Robert Jakob 2025-04-19 23:58:57 +02:00
• 188c75c681 Add V4 Multi-Agent Peer Review System Robert Jakob 2025-04-19 23:56:58 +02:00
• 5bb4b68edc Initial commit: Manuscript analysis tools with V2 and V3 implementations Robert Jakob 2025-04-16 17:48:49 +02:00
• 8294126ef1 Update V2: Improved PDF parsing and added multiple requirement sets Robert Jakob 2025-04-15 10:57:23 +02:00
• 832699b2cb Update README.md Robert Jakob 2025-04-10 23:14:33 +02:00
• 07f58f134c Update README.md Robert Jakob 2025-04-10 22:59:49 +02:00
• 22e03f1c57 Update README.md Robert Jakob 2025-04-10 22:59:24 +02:00
• ef2c360ae6 Rename AI_DeskReject to V2_Editorial_First_Decision_Support for clarity Robert Jakob 2025-04-10 22:58:36 +02:00
• 9f90e9d295 Add main project README with mission and solutions overview Robert Jakob 2025-04-10 22:50:53 +02:00
• c6a6671cc3 Clean up repository structure, move all files to AI_DeskReject Robert Jakob 2025-04-10 22:43:05 +02:00
• ab3b30d8b2 Move project files to AI_DeskReject subfolder Robert Jakob 2025-04-10 22:41:59 +02:00
• ff49d8e2a0 Merge remote changes and resolve conflicts Robert Jakob 2025-04-10 22:40:11 +02:00
• 85cfc02213 Update .gitignore to exclude manuscripts and analysis results Robert Jakob 2025-04-10 22:38:43 +02:00
• 69e87f769c Initial commit: Manuscript requirements checker with OpenAI integration Robert Jakob 2025-04-10 22:36:44 +02:00
• 9c977a768d Update README.md Robert Jakob 2025-04-10 21:36:44 +02:00
• 9f4a5def03 Update README.md Robert Jakob 2025-04-10 21:36:32 +02:00
• 7809a11937 Create README.md Robert Jakob 2025-04-10 21:35:47 +02:00
• 64c0f9cf85 Update README.md Robert Jakob 2025-04-09 11:47:11 +02:00
• 75540011db Initial commit Robert Jakob 2025-04-09 11:45:37 +02:00